Selected Publications 2009

Atkin OK, Sherlock D, Fitter AH, Jarvis S, Hughes JK, Campbell C, Hurry V, Hodge A (2009) Temperature dependence of respiration in roots colonized by arbuscular mycorrhizal fungi. New Phytologist 182: 188-199

Bylesjö M, Nilsson R, Srivastava V, Grönlund A, Johansson AI, Jansson S, Karlsson J, Moritz T, Wingsle G, Trygg J (2009) Integrated analysis of transcript, protein and metabolite data to study lignin biosynthesis in hybrid aspen. Journal of Proteome Research 8: 199-210

Courtois-Moreau CL, Pesquet E, Sjödin A, Muniz L, Bollhöner B, Kaneda M, Samuels L, Jansson S, Tuominen H (2009) A unique program for cell death in xylem fibers of Populus stem. Plant Journal 58: 260-274

Fracheboud Y, Luquez V, Björkén L, Sjödin A, Tuominen H, Jansson S (2009) The control of autumn senescence in european aspen. Plant Physiology 149: 1982-1991

Frenkel M, Külheim C, Johansson Jänkänpää H, Skogström O, Dall'Osto L, Ågren J, Bassi R, Moritz T, Moen J, Jansson S (2009) Improper excess light energy dissipation in Arabidopsis results in a metabolic reprogramming. BMC Plant Biology 9: Art. No. 12

Grönlund A, Bhalerao RP, Karlsson J (2009) Modular gene expression in Poplar: a multilayer network approach. New Phytologist 181: 315-322

Guénin S, Mauriat M, Pelloux J, Van Wuytswinkel O, Bellini C, Gutierrez L (2009) Normalization of qRT-PCR data: the necessity of adopting a systematic, experimental conditions-specific, validation of references. Journal of Experimental Botany 60: 487-493

Hytönen T, Elomaa P, Moritz T, Junttila O (2009) Gibberellin mediates daylength-controlled differentiation of vegetative meristems in strawberry ( Fragaria x ananassa Duch). BMC Plant Biology 9: Art. No. 18

Ikeda Y, Men SZ, Fischer U, Stepanova AN, Alonso JM, Ljung K, Grebe M (2009) Local auxin biosynthesis modulates gradient-directed planar polarity in Arabidopsis. Nature Cell Biology 11: 731-738

Kumar M, Thammannagowda S, Bulone V, Chiang V, Han K-H, Joshi CP, Mansfield SD, Mellerowicz E, Sundberg B, Teeri T, Ellis BE (2009) An update on the nomenclature for the cellulose synthase genes in Populus. Trends in Plant Science 14: 248-254

Lewis DR, Wu GS, Ljung K, Spalding EP (2009) Auxin transport into cotyledons and cotyledon growth depend similarly on the ABCB19 Multidrug Resistance-like transporter. Plant Journal 60: 91-101

Love J, Björklund S, Vahala J, Hertzberg M, Kangasjärvi J, Sundberg B (2009) Ethylene is an endogenous stimulator of cell division in the cambial meristem of Populus. Proceedings of the National Academy of Sciences of the United States of America 106: 5984-5989

Lundmark M, Hurry V, Lapointe L (2009) Low temperature maximizes growth of Crocus vernus (L.) Hill via changes in carbon partitioning and corm development. Journal of Experimental Botany 60: 2203-2213

Mauriat M, Moritz T (2009) Analyses of GA20ox- and GID1-over-expressing aspen suggest that gibberellins play two distinct roles in wood formation. Plant Journal 58: 989-1003

Näsholm T, Kielland K, Ganeteg U (2009) Uptake of organic nitrogen by plants. New Phytologist 182: 31-48

Petersson SV, Johansson AI, Kowalczyk M, Makoveychuk A, Wang JY, Moritz T, Grebe M, Benfey PN, Sandberg G, Ljung K (2009) An auxin gradient and maximum in the Arabidopsis root apex shown by high-resolution cell-specific analysis of IAA distribution and synthesis. Plant Cell 21: 1659-1668

Rawat R, Schwartz J, Jones MA, Sairanen I, Cheng YF, Andersson CR, Zhao YD, Ljung K, Harmer SL (2009) REVEILLE1, a Myb-like transcription factor, integrates the circadian clock and auxin pathways. Proceedings of the National Academy of Sciences of the United States of America 106: 16883-16888

Redestig H, Fukushima A, Stenlund H, Moritz T, Arita M, Saito K, Kusano M (2009) Compensation for systematic cross-contribution improves normalization of mass spectrometry based metabolomics data. Analytical Chemistry 81: 7974-7980

Sani M-A, Keech O, Gardeström P, Dufourc EJ, Gröbner G (2009) Magic-angle phosphorus NMR of functional mitochondria: in situ monitoring of lipid response under apoptotic-like stress. FASEB Journal 23: 2872-2878

Sjödin A, Street NR, Sandberg G, Gustafsson P, Jansson S (2009) The Populus Genome Integrative Explorer (PopGenIE): a new resource for exploring the Populus genome. New Phytologist 182: 1013-1025

Sorefan K, Girin T, Liljegren SJ, Ljung K, Robles P, Galván-Ampudia CS, Offringa R, Friml J, Yanofsky MF, Østergaard L (2009) A regulated auxin minimum is required for seed dispersal in Arabidopsis. Nature 459: 583-586

Srivastava V, Srivastava MK, Chibani K, Nilsson R, Rouhier N, Melzer M, Wingsle G (2009) Alternative splicing studies of the reactive oxygen species gene network in Populus reveal two isoforms of high-isoelectric-point superoxide dismutase. Plant Physiology 149: 1848-1859

Stenlund H, Johansson E, Gottfries J, Trygg J (2009) Unlocking interpretation in near infrared multivariate calibrations by orthogonal partial least squares. Analytical Chemistry 81: 203-209

Ubeda-Tomás S, Federici F, Casimiro I, Beemster GTS, Bhalerao R, Swarup R, Doerner P, Haseloff J, Bennett MJ (2009) Gibberellin signaling in the endodermis controls Arabidopsis root meristem size. Current Biology 19: 1194-1199

Van der Merwe MJ, Osorio S, Moritz T, Nunes-Nesi A, Fernie AR (2009) Decreased mitochondrial activities of malate dehydrogenase and fumarase in tomato lead to altered root growth and architecture via diverse mechanisms. Plant Physiology 149: 653-669

Wientjes E, Oostergetel GT, Jansson S, Boekema EJ, Croce R (2009) The role of lhca complexes in the supramolecular organization of higher plant photosystem I. Journal of Biological Chemistry 284: 7803-7810




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